Skylign – Creating Logos Representing both Sequence Alignments and profile hidden Markov models

Skylign

:: DESCRIPTION

Skylign is a tool for creating logos representing both sequence alignments and profile hidden Markov models.

::DEVELOPER

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux
Perl

:: DOWNLOAD

:: MORE INFORMATION

Citation

Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models.
Wheeler, T.J., Clements, J., Finn, R.D.
BMC Bioinformatics Volume 15 (2014) p.7 DOI: 10.1186/1471-2105-15-7

Referee – Rapid, Separable Compression for Sequence Alignments

Referee

:: DESCRIPTION

Referee is a command-line tool that takes sequence alignment SAM files and compresses them in a lossless manner.

::DEVELOPER

Kingsford Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / MacOs

:: DOWNLOAD

:: MORE INFORMATION

Citation

Darya Filippova, Carl Kingsford (2015).
Rapid, separable compression enables fast analyses of sequence alignments.
Proceedings of the 6th ACM Conference on Bioinformatics, Computational Biology and Health Informatics, pages 194-201.

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