SemanticSBML 2.0

:: DESCRIPTION

SemanticSBML create, check, annotate, merge SBML (System Biology Markup Lanugage) models. The program includes a graphical user interface as well as a console interface that can process batch jobs.

Semantic annotations can be used to define – among other things – the biochemical meaning of model elements. The tool semanticSBML is made to handle such annotations. It helps you to edit them and to check and merge your models.

::DEVELOPER

semanticSBML team at Humboldt University Berlin

:: SCREENSHOTS

:: REQUIREMENTS

• Ubuntu/Debian/Windows with Cygwin
• Python
• Qt4.x
• PyQt4.x
• SOAP.py
• libSBML3
• Graphviz

:: DOWNLOAD

SemanticSBML

:: MORE INFORMATION

Citation

For citing semanticSBML, please refer to: Krause F, Uhlendorf J., Lubitz T., Schulz M., Klipp E., Liebermeister W. (2010),
Annotation and merging of SBML models with semanticSBML,
Bioinformatics 26 (3), 421-422, doi:10.1093/bioinformatics/btp642.