FASTA Match Regular Expression 1.0 – Selects FASTA records whose deflines match a Perl Regular Expression

FASTA Match Regular Expression 1.0

:: DESCRIPTION

FASTA Match Regular Expression selects FASTA records whose deflines match a Perl regular expression. Matches can be case-sensitive or case-insensitive.

::DEVELOPER

Statistical Computational Biology Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / WIndows / MacOsX
  • Perl

:: DOWNLOAD

  FASTA Match Regular Expression

:: MORE INFORMATION

PS_SNP – Prioritize and Select SNPs for Whole Genome Association Studies with Two-stage Designs

PS_SNP

:: DESCRIPTION

PS_SNP is a novel SNP selection procedure for whole genome association studies with two-stage designs.

::DEVELOPER

Jing Li

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 PS_SNP

:: MORE INFORMATION

Citation

Jing Li.
Prioritize and select SNPs for association studies with multi-stage designs.
J Comput Biol. 2008 Apr;15(3):241-57.

TaxonGap 2.4.1 – Compare and Select Individual Biomarkers.

TaxonGap 2.4.1

:: DESCRIPTION

TaxonGap is a visualization tool for intra- and inter-species variation among individual biomarkers

::DEVELOPER

Prof. Dr. Bernard De Baets

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux/windows /MacOsX
  • Java

:: DOWNLOAD

  TaxonGap

:: MORE INFORMATION

Citation

B. Slabbinck, P. Dawyndt, M. Martens, P. De Vos and B. De Baets,
TaxonGap: a visualisation tool for intra- and inter-species variation among individual biomarkers,
Bioinformatics, 24(6), 866-867

 

RssGsc 1.1 – Selecting Interesting Gene Sets

RssGsc 1.1

:: DESCRIPTION

RssGsc (Rank Sum Statistics for Gene Set Collections  ) is a bio-informatics tool. This tool allows to perform enrichment analysis of gene sets, that is, to identify biologically meaningful gene sets from a ranked list of genes (experimental data).

::DEVELOPER

Pablo Cingolani

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Java

:: DOWNLOAD

 RssGsc

:: MORE INFORMATION