SEGID

:: DESCRIPTION

SEGID is a bioinformatics webtool for conserved SEGment IDentification. The software is a sequence analysis tool designed to identify conserved segments in a (multiple) sequence alignment. Conserved segments are high-scoring substrings in a long alignment which are probably biologically meaningful. SEGID accepts an alignment, converts the alignment into a sequence of numbers, one for each column, identifies its conserved segments, and generates graphical output. (It can also directly accept a sequence of numbers as input.)

::DEVELOPER

Lusheng Wang ,  Ying Xu

:: SCREENSHOTS

:: REQUIREMENTS

• Windows /Linux/MacOsX
• Java

:: DOWNLOAD

 SEGID

:: MORE INFORMATION

Citation

Lusheng Wang, Ying Xu,
SEGID: identifying interesting segments in sequence alignments,
Bioinformatics, 19(2), 2003;