scLVM 0.1
:: DESCRIPTION
scLVM (single-cell Latent Variable Model) is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources of variation.
::DEVELOPER
Institute of Computational Biology, German Research Center for Environmental Health (GmbH)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux / MacOsX
- Python
- R
:: DOWNLOAD
:: MORE INFORMATION
Citation
Nat Biotechnol. 2015 Feb;33(2):155-60. doi: 10.1038/nbt.3102. Epub 2015 Jan 19.
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells.
Buettner F, Natarajan KN, Casale FP, Proserpio V, Scialdone A, Theis FJ, Teichmann SA, Marioni JC, Stegle O