pGenN – Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature

pGenN

:: DESCRIPTION

pGenN is a system specifically designed for plant gene normalization. This pGenN website enables user search gene normalization information by keywords, a list of PMIDs, or UniProt ACs in the database. The results (Gene names and corresponding UniProt ACs) are displayed in sortable tables with text evidence and downloadable for further research.

::DEVELOPER

BioNLP and Text Mining Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature.
Ding R, Arighi CN, Lee JY, Wu CH, Vijay-Shanker K.
PLoS One. 2015 Aug 10;10(8):e0135305. doi: 10.1371/journal.pone.0135305.

Utopia Documents 2.4.4- Tool for Interacting with the Scientific Literature

Utopia Documents 2.4.4

:: DESCRIPTION

Utopia Documents is a novel tool for interacting with the scientific literature. Utopia Documents allows new ways of thinking about your documents: it brings your papers to life by linking to live resources on the web and turning static data into live interactive content.

::DEVELOPER

The University of Manchester

:: SCREENSHOTS

:: REQUIREMENTS

  • Mac OS X / Windows / Linux

:: DOWNLOAD

Utopia Documents

:: MORE INFORMATION

Citation

T. K. Attwood, D. B. Kell, P. Mcdermott, J. Marsh, S. R. Pettifer, and D. Thorne.
Calling international rescue: knowledge lost in literature and data landslide!
Biochemical Journal, Dec 2009.

GeneIndex / GeneIndexHD / GeneIndex Bacteria 1.30 – iOS Applications to Lookup Scientific Literature and Gene Information.

GeneIndex / GeneIndexHD / GeneIndex Bacteria 1.30

:: DESCRIPTION

GeneIndex / GeneIndexHD quickly provides information about genes from various sources. It also includes a RSS reader for journal feeds as well as a PubMed viewer.

In response to requests for more bacteria, GeneIndex for Bacteria contains gene info from NCBI for over 2000 strains of bacteria that each have at least 1000 genes recorded.

::DEVELOPER

Keith Ching

:: SCREENSHOTS

:: REQUIREMENTS

  • iPad/iPhone

:: DOWNLOAD

 GeneIndex / GeneIndexHD / GeneIndex Bacteria

:: MORE INFORMATION