SALT 20140716
:: DESCRIPTION
SALT (Sensitive and Accurate protein domain cLassification Tool) can accurately and sensitivity classify short reads of NGS into protein domain families. It is based on profile HMM and a supervised graph contribution algorithm. Compared to existing tools, it has high sensitivity and specificity in classifying short reads into their native domain families.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Python
- g++ compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2013 Sep 1;29(17):2103-11. doi: 10.1093/bioinformatics/btt357. Epub 2013 Jun 19.
A Sensitive and Accurate protein domain cLassification Tool (SALT) for short reads.
Zhang Y1, Sun Y, Cole JR.