RIPCAL 2.0 – Analysis of RIP in Fungal Genomic DNA Repeats

RIPCAL 2.0

:: DESCRIPTION

RIPCAL is a bioinformatics tool for the analysis of repeat-induced point mutation (RIP) of fungi.

::DEVELOPER

Dr James Hane

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Perl
:: DOWNLOAD

 RIPCAL

:: MORE INFORMATION

Citation

BMC Genomics. 2010 Nov 24;11:655. doi: 10.1186/1471-2164-11-655.
In silico reversal of repeat-induced point mutation (RIP) identifies the origins of repeat families and uncovers obscured duplicated genes.
Hane JK1, Oliver RP.

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences.
Hane JK, Oliver RP.
BMC Bioinformatics. 2008 Nov 12;9:478. doi: 10.1186/1471-2105-9-478.