SIRENE 1.1 – Supervised Inference of REgulatory NEtworks

SIRENE 1.1

:: DESCRIPTION

A MATLAB implementation of SIRENE that allows you in reconstruct missing regulations in a regulatory network given expression data.

::DEVELOPER

Centre for Computational Biology

:: SCREENSHOTS

 N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • MatLab

:: DOWNLOAD

 SIRENE

 :: MORE INFORMATION

Citation

SIRENE: supervised inference of regulatory networks.
Mordelet F, Vert JP.
Bioinformatics. 2008 Aug 15;24(16):i76-82. doi: 10.1093/bioinformatics/btn273

SignaLink 2.0 – Multilayered Regulatory Networks

SignaLink 2.0

:: DESCRIPTION

SignaLink is a signaling pathway resource with multi-layered regulatory networks

::DEVELOPER

the Earlham Institute.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

NO

:: MORE INFORMATION

Citation

SignaLink: Multilayered Regulatory Networks.
Csabai L, et al.
Methods Mol Biol. 2018;1819:53-73. doi: 10.1007/978-1-4939-8618-7_3.

SignaLink 2 – a signaling pathway resource with multi-layered regulatory networks.
Fazekas D, et al.
BMC Syst Biol. 2013 Jan 18;7:7. doi: 10.1186/1752-0509-7-7.

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