RNAcommender v0.1-beta.1 – Genome-wide Recommendation of RNA-protein Interaction

RNAcommender v0.1-beta.1

:: DESCRIPTION

RNAcommender is a tool for genome-wide recommendation of RNA-protein interactions. It is a recommender system capable of suggesting RNA targets to unexplored RNA binding proteins, by propagating the available interaction information, taking into account the protein domain composition and the RNA predicted secondary structure.

::DEVELOPER

Gianluca Corrado

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Python

:: DOWNLOAD

 RNAcommender 

:: MORE INFORMATION

Citation

RNAcommender: genome-wide recommendation of RNA-protein interactions.
Corrado G, Tebaldi T, Costa F, Frasconi P, Passerini A.
Bioinformatics. 2016 Aug 8. pii: btw517.