iRSpot-EL – Identify Recombination Spots with an ensemble learning approach

iRSpot-EL

:: DESCRIPTION

iRSpot-EL is a predictor: by fusing different modes of pseudo K-tuple nucleotide composition and mode of dinucleotide-based auto-cross covariance into an ensemble classifier of clustering approach.

::DEVELOPER

Liu Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Liu B, Wang S, Long R, Chou KC.
iRSpot-EL: identify recombination spots with an ensemble learning approach.
Bioinformatics. 2017 Jan 1;33(1):35-41. doi: 10.1093/bioinformatics/btw539. Epub 2016 Aug 16. PMID: 27531102.

iRSpot-TNCPseAAC – Identify Recombination Spots with Trinucleotide Composition and Pseudo Amino Scid Components

iRSpot-TNCPseAAC

:: DESCRIPTION

The web-server iRSpot-TNCPseAAC was developed for identifying the recombination hotspots and coldspots.

::DEVELOPER

Xiao Lab

:: SCREENSHOTS

n/a

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

iRSpot-TNCPseAAC: identify recombination spots with trinucleotide composition and pseudo amino acid components.
Qiu WR, Xiao X, Chou KC.
Int J Mol Sci. 2014 Jan 24;15(2):1746-66. doi: 10.3390/ijms15021746.

iRSpot-PseDNC – Prediction of Recombination Spots in S.cerevisiae Genome

iRSpot-PseDNC

:: DESCRIPTION

The web-server iRSpot-PseDNC was developed for identifying the recombination hotspots and coldspots.

::DEVELOPER

LinDing Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2013 Apr 1;41(6):e68. doi: 10.1093/nar/gks1450. Epub 2013 Jan 8.
iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition.
Chen W1, Feng PM, Lin H, Chou KC.