RECLU 1.0 – Clustering pipeline with multiple scales for Capped Analysis of Gene Expression (CAGE) datasets

RECLU 1.0

:: DESCRIPTION

RECLU is a reproducible clustering pipeline with multiple scales using capped analysis of gene expression (CAGE). This program discoveries numerous alternative transcription start sites (TSSs) with the biological implication for your sample.

::DEVELOPER

FANTOM

:: SCREENSHOTS

N/A

: REQUIREMENTS

  • Linux/ MacOsX

:: DOWNLOAD

 RECLU

:: MORE INFORMATION

Citation

BMC Genomics. 2014 Apr 25;15(1):269. doi: 10.1186/1471-2164-15-269.
RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE).
Ohmiya H, Vitezic M, Frith MC, Itoh M, Carninci P, Forrest AR, Hayashizaki Y, Lassmann T1; FANTOM Consortium.