FREAD 3.0.1 – Database Search Loop Structure Prediction protocol

FREAD 3.0.1

:: DESCRIPTION

FREAD is a database search loop structure prediction protocol. Loops are generally located in the protein’s surface and they are known to be notoriously difficult to predict.The basic assumption of FREAD is that local sequence similarity may determine the backbone structure of a local protein structure if it is constrained within anchor structures.

::DEVELOPER

Oxford Protein Informatics Group (OPIG)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux

:: DOWNLOAD

FREAD

Citation

FREAD revisited: Accurate loop structure prediction using a database search algorithm.
Choi Y, Deane CM.
Proteins. 2010 May 1;78(6):1431-40. doi: 10.1002/prot.22658.

Scriptome – Protocols for Manipulating Biological Data

Scriptome

:: DESCRIPTION

The Scriptome is a set of tools that filter, format, and merge data in tabular or common biological formats. Use single tools to take a quick look at data, or string tools together in a protocol to explore the data more deeply.

::DEVELOPER

Computational Biology Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOsX / Linux
  • Perl

:: DOWNLOAD

 Scriptome

:: MORE INFORMATION

Cell Imaging 4.1 / Cell Imaging HD 4.1 – Cell Imaging Reagent Guide & Protocols App

Cell Imaging 4.1 / Cell Imaging HD 4.1

:: DESCRIPTION

Cell Imaging is designed to help you find fluorescent dyes, reagents and protocols for cell biology related fluorescence microscopy applications.

::DEVELOPER

Thermo Fisher Scientific Inc.

:: SCREENSHOTS

:: REQUIREMENTS

  • iPhone /  iPod touch / Android devices.

:: DOWNLOAD

Cell Imaging for iPhone/iPod touch ; for Android ; Cell Imaging HD , For Andorid

:: MORE INFORMATION

Cytometry 4.0 – Find Flow Cytometry Reagents and Protocols in Mobile Machine

Cytometry 4.0

:: DESCRIPTION

Cytometry is designed to help you find fluorescent dyes, reagents and protocols for cell biology related flow cytometry applications.

::DEVELOPER

Invitrogen Corporation

:: SCREENSHOTS

:: REQUIREMENTS

  • iPhone /  iPod touch / Android devices.

:: DOWNLOAD

 Flow Cytometry App for IOS , for Android

:: MORE INFORMATION

BioLegend ELISA 1.1 – ELISA Active Protocol

BioLegend ELISA 1.1

:: DESCRIPTION

BioLegend’s ELISA app is your one stop shop for all things ELISA.ELISA (Enzyme-linked immunosorbent assay) is a simple, cost-effect technique performed on serum, plasma, cell supernatant, and other biological fluids to determine the presence of an antigen in a sample.

::DEVELOPER

BioLegend

:: SCREENSHOTS

:: REQUIREMENTS

  • iPhone /  iPad

:: DOWNLOAD

 BioLegend ELISA

:: MORE INFORMATION

iLAP 1.3.3 – Laboratory Data Management, Analysis and Protocol Development

iLAP 1.3.3

:: DESCRIPTION

 iLAP (Laboratory data management, Analysis and Protocol development) combines experimental protocol development, wizard-based data acquisition and high-throughput data analysis into one single, integrated system.

::DEVELOPER

Genomics & Bioinformatics Graz, Graz University of Technology

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • PostgreSQL
  • JEE
  • Apache Tomcat

:: DOWNLOAD

  iLAP

:: MORE INFORMATION

Citation

Stocker G, Fischer M, Rieder D, Bindea G, Kainz S, Oberstolz M, McNally JG and Trajanoski Z,
iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis,
BMC Bioinformatics, 2009 Nov 10(6)