:: DESCRIPTION
HotSPRing is a web server to predict the host spots in RNA binding proteins (RBPs)
::DEVELOPER
Computational Structural Biology Lab , Indian Institute of Technology Kharagpur
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Probing binding hot spots at protein-RNA recognition sites.
Barik A, Nithin C, Karampudi NB, Mukherjee S, Bahadur RP.
Nucleic Acids Res. 2016 Jan 29;44(2):e9. doi: 10.1093/nar/gkv876.
:: DESCRIPTION
mCrossBase is a database of RNA-binding protein (RBP) binding motifs and crosslink sites defined jointly from CLIP data using a novel algorithm mCross
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Feng et al. (2019),
Modeling the in vivo specificity of RNA-binding proteins by precisely registering protein-RNA crosslink sites.
Mol Cell. 74:1189-1204.E6.
:: DESCRIPTION
PRNA is a novel classificationsoftware to identify the RNA binding sites in proteins by combining a new interacting feature (interaction propensity) with other sequence- and structure-based features
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Liu ZP, Wu LY, Wang Y, Zhang XS, and Chen L.
Prediction of protein-RNA binding sites by a random forest method with combined features.
Bioinformatics 26(13):1616-1622.