EnPPIpred – Enteropathogen Protein Protein Interactions (PPIs) Prediction

EnPPIpred

:: DESCRIPTION

EnPPIpred is a web server that predicts intra protein protein interaction of entheropathogen including Escherichia coli (E. coli), Salmonella Typhi, Shigella flexneri, Vibrio cholerae & Yersinia entrocolitica.Escherichia coli (E. coli) data set was used to build Support Vector Machine model.

::DEVELOPER

EnPPIpred team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Prediction of Intra-Species Protein-Protein Interactions in Enteropathogens Facilitating Systems Biology Study.
Barman RK, Jana T, Das S, Saha S.
PLoS One. 2015 Dec 30;10(12):e0145648. doi: 10.1371/journal.pone.0145648.

GLoSA 2.2 – Protein-ligand and Protein-protein Interactions

GLoSA 2.2

:: DESCRIPTION

G-LoSA (Graph-based Local Structure Alignment) is an efficient computational method to align protein local structures in a sequence order independent way and to provide the GA-score (between 0 and 1), a size-independent quantity of structural similarity for a given local structure pair.

::DEVELOPER

Wonpil Im Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux
C++ Compiler

:: DOWNLOAD

G-LoSA

:: MORE INFORMATION

Citation

Lee HS, Im W.
G-LoSA for Prediction of Protein-Ligand Binding Sites and Structures.
Methods Mol Biol. 2017;1611:97-108. doi: 10.1007/978-1-4939-7015-5_8. PMID: 28451974.