INTREPED 2.0 – DNA Repair Protein Prediction server

INTREPED 2.0

:: DESCRIPTION

The INTREPED (INTeractive dna REPair prEDiction) web server is a collection of services for predicting properties relating to DNA repair. DNA repair is thought to exist in all organisms that have an active metabolism, and repair systems are crucial for repairing many types of DNA damage. External damage includes (but is not limited to) ionizing (UV) radiation, tobacco smoke, and chemical alteration. Examples of internal damage are DNA copying errors, oxygen byproducts resulting from metabolism, and hydrolysis.

::DEVELOPER

Akutsu Laboratory (Laboratory of Mathematical Bioinformatics)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2009 Jan 20;10:25. doi: 10.1186/1471-2105-10-25.
Identification of novel DNA repair proteins via primary sequence, secondary structure, and homology.
Brown JB, Akutsu T.

DextMP – Moonlighting Protein Prediction by Deep Dive into Text

DextMP

:: DESCRIPTION

DextMP Text-mining tool to find Moonlighting Proteins from publication titles, abstract and functional description in UniProt.

::DEVELOPER

Kihara Bioinformatics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

DextMP

:: MORE INFORMATION

Citation

DextMP: deep dive into text for predicting moonlighting proteins.
Khan IK, Bhuiyan M, Kihara D.
Bioinformatics. 2017 Jul 15;33(14):i83-i91. doi: 10.1093/bioinformatics/btx231.