IMMP explores two approaches for the investigation of gene-miRNA relationships by integrating mRNA expression and protein expression data. It presents ranked miRNAs lists according to their effects on cancer development and constructed modules containing mRNAs, proteins, and miRNAs, in which these three molecular types are highly correlated.
CellFinder maps validated gene and protein expression, phenotype and images related to cell types. The data allow characterization and comparison of cell types and can be browsed by using the body browser and by searching for cells or genes. All cells are related to more complex systems such as tissues, organs and organisms and arranged according to their position in development.
Nucleic Acids Res. 2014 Jan;42(Database issue):D950-8. doi: 10.1093/nar/gkt1264. Epub 2013 Dec 3. CellFinder: a cell data repository.
Stachelscheid H1, Seltmann S, Lekschas F, Fontaine JF, Mah N, Neves M, Andrade-Navarro MA, Leser U, Kurtz A.
Clone Manager – the PSF cloning and protein expression system (LIMS) is based on an Oracle database (v. 8.1.6) and a frontend developed with Microsoft Access 97. In addition, some perl scripts and Java programs are used for batch data entry.