GlycoPP 1.0 – Prediction of Glycosites in Prokaryotic Protein Sequences

GlycoPP 1.0

:: DESCRIPTION

GlycoPP is a webserver for predicting potential N-and O-glycosites in prokaryotic protein sequence(s), where N-glycosite is an Asn residue and O-glycosite could be a serine or threonine residue having a glycan attached covalently and enzymatically at amide or hydroxyl group respectively.

::DEVELOPER

GlycoPP team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

PLoS One. 2012;7(7):e40155. doi: 10.1371/journal.pone.0040155. Epub 2012 Jul 9.
GlycoPP: a webserver for prediction of N- and O-glycosites in prokaryotic protein sequences.
Chauhan JS1, Bhat AH, Raghava GP, Rao A.

FrameD 20070223 – Predict Coding Regions in Prokaryotic and Eukaryotic Sequence

FrameD 20070223

:: DESCRIPTION

FrameD is a program that predicts coding regions in prokaryotic and eukaryotic sequences that may contain frameshifts.

::DEVELOPER

Thomas Schiex

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows

:: DOWNLOAD

 FrameD

:: MORE INFORMATION

Citation

FrameD: a flexible program for quality check and gene prediction in prokaryotic genomes and noisy matured eukaryotic sequences
Thomas Schiex, Jérôme Gouzy, Annick Moisan, and Yannick de Oliveira
Nucl. Acids. Res. 2003 31: 3738-3741.