:: DESCRIPTION
SCIP is an open source multi-channel, multi-process, time-lapse morphological and functional microscopy images analyser.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Martins L, Neeli-Venkata R, Oliveira SMD, Häkkinen A, Ribeiro AS, Fonseca JM.
SCIP: a single-cell image processor toolbox.
Bioinformatics. 2018 Dec 15;34(24):4318-4320. doi: 10.1093/bioinformatics/bty505. PMID: 29931314.
:: DESCRIPTION
Cromwell is an implementation of our algorithms for low-level processing of mass spectrometry proteomics data. Cromwell represents our third attempt (at least) to find a method to process spectra that both works quickly and achieves reasonably good results.
::DEVELOPER
Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Cancer Inform. 2005;1:41-52.
Understanding the characteristics of mass spectrometry data through the use of simulation.
Coombes KR, Koomen JM, Baggerly KA, Morris JS, Kobayashi R.
:: DESCRIPTION
SeCaPr is a computational pipeline for processing Illumina sequence capture data
::DEVELOPER
:: SCREENSHOTS
N/a
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
PeerJ. 2018 Jul 13;6:e5175. doi: 10.7717/peerj.5175. eCollection 2018.
SECAPR-a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments.
Andermann T, Cano á, Zizka A, Bacon C, Antonelli A
