Beacon Designer 8.21 – Automate Real Time PCR Primer & Probe Design

Beacon Designer 8.21

:: DESCRIPTION

Beacon Designer™ automates the design of real time primers and probes. It is used by molecular biologists worldwide to design successful real time PCR assays. It saves the time and the money involved in failed experiments. Beacon Designer™ is a flexible solution to your real time primer and probe design needs and pays for itself many times over.

::DEVELOPER

PREMIER Biosoft

:: SCREENSHOTS

:: REQUIREMENTS

  • MacOsX / Windows

:: DOWNLOAD

Beacon Designer Demo

:: MORE INFORMATION

Mprobe 2.0 – Computer-aided Probe Design for Oligonucleotide Microarrays

Mprobe 2.0

:: DESCRIPTION

Mprobe is software to design optimal probes for oligonucleotide microarrays with the following new features. First, a paradox-based sequence database management system (SDMS) has been developed and integrated into the software, which can recognize the sequences in GenBank, EMBL, and FastA formats. Second, the threshold to reject the probes based on secondary structure was avoided.

::DEVELOPER

Center of Computational Biology, Beijing Institute of Basic Medical Sciences

:: SCREENSHOTS

Mprobe

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 Mprobe

:: MORE INFORMATION

Citation:

Mprobe 2.0: computer-aided probe design for oligonucleotide microarray.
Li W, Ying X.
Appl Bioinformatics. 2006;5(3):181-6.

MeltCalc 2.0 – Thermodynamic Probe Design

MeltCalc 2.0

:: DESCRIPTION

MeltCalc is the ultimate thermodynamic modelling spreadsheet for Excel. The software will provide you with a thermodynamically optimized probe at its best!

::DEVELOPER

Ekkehard Schütz and Nicolas von Ahsen.

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / MacOsX
  • Excel

:: DOWNLOAD

MeltCalc

:: MORE INFORMATION

Citation

Ekkehard Schütz and Nicolas von Ahsen.
Influencing factors of dsDNA dye (high-resolution) melting curves and improved genotype call based on thermodynamic considerations
BioTechniques 1999;27:1218

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