Tag: PRince

PRINCE v2.3 – VNTR Copy Number Approximation

PRINCE v2.3

:: DESCRIPTION

PRINCE (Processing Reads to Infer the Number of Copies via Estimation) estimates Variable Number Tandem Repeats (VNTR) copy number from raw next generation sequencing (NGS) data.

::DEVELOPER

Computational Methods for Paleogenomics and Comparative Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • conda

:: DOWNLOAD

PRINCE

:: MORE INFORMATION

Citation

Mehrdad Mansouri and Julian Booth and Margaryta Vityaz and Cedric Chauve and Leonid Chindelevitch
PRINCE: Accurate Approximation of the Copy Number of Tandem Repeats
18th International Workshop on Algorithms in Bioinformatics (WABI 2018)

PRince – Structural and Physicochemical analysis of Protein-RNA Interface

PRince

:: DESCRIPTION

PRince is a web server which analyzes the structural features and physicochemical properties of the protein-RNA interface.

::DEVELOPER

Computational Structural Biology Lab , Indian Institute of Technology Kharagpur

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W440-4. doi: 10.1093/nar/gks535. Epub 2012 Jun 11.
PRince: a web server for structural and physicochemical analysis of protein-RNA interface.
Barik A1, Mishra A, Bahadur RP.