PRICE 1.2

:: DESCRIPTION

PRICE (Paired-Read Iterative Contig Extension) is a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively increase the size of existing contigs. Initially, those contigs can be individual reads from a subset of the paired-read dataset, non-paired reads from sequencing technologies that provide non-paired data, or contigs that were output from a prior run of PRICE or any other assembler.

::DEVELOPER

DeRisi Lab, UCSF

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• C++ Compiler

:: DOWNLOAD

 PRICE

:: MORE INFORMATION

Citation

PRICE: Software for the Targeted Assembly of Components of (Meta)Genomic Sequence Data
J. Graham Ruby, Priya Bellare and Joseph L. DeRisi
G3 March 23, 2013 g3.113.005967