Tag: Preclustering

SLP – Single-Linkage Preclustering for improved OTU clustering

SLP

:: DESCRIPTION

 SLP is a software for single-linkage preclustering for improved OTU clustering . It was based on pairwise distances this is used as a preliminary step before average linkage clustering of short (<250nt) sequences.

::DEVELOPER

The VAMPS project 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 SLP

:: MORE INFORMATION

Citation:

Huse, SM, Mark Welch, D, Morrison, HG, and Sogin, ML (2010)
Ironing out the wrinkles in the rare biosphere through improved OTU clustering.
Environmental Microbiology (2010) 12(7), 1889-1898.