MSPrep 1.1

:: DESCRIPTION

MSPrep is an R package for post processing of metabolomic data. Performs summarization of replicates, filtering, imputation, normalization, generates diagnostic plots and outputs final analytic datasets for downstream analysis

::DEVELOPER

Katerina J. Kechris, Ph.D.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows/Linux
R

:: DOWNLOAD

MSPrep

:: MORE INFORMATION

Citation

MSPrep–summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data.
Hughes G, Cruickshank-Quinn C, Reisdorph R, Lutz S, Petrache I, Reisdorph N, Bowler R, Kechris K.
Bioinformatics. 2014 Jan 1;30(1):133-4. doi: 10.1093/bioinformatics/btt589.

Anchor 0.3.1

:: DESCRIPTION

Anchor is a set of tools for making automated improvements to de novo assemblies.

Anchor currently includes two main modules:

– Correction of erroneous single-nucleotide variants and small indels
– Scaffold-filling by local re-assembly