PolyAMotif – Predict Poly(A) Motifs in human DNA sequence

PolyAMotif

:: DESCRIPTION

PolyAMotif is able to predict the 12 main variants of human poly(A) motifs, i.e., AATAAA, ATTAAA, AAAAAG, AAGAAA, TATAAA, AATACA, AGTAAA, ACTAAA, GATAAA, CATAAA, AATATA, and AATAGA.

::DEVELOPER

Structural and Functional Bioinformatics Group, King Abdullah University of Science and Technology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

 PolyAMotif

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Jul 1;29(13):i316-25. doi: 10.1093/bioinformatics/btt218.
Poly(A) motif prediction using spectral latent features from human DNA sequences.
Xie B1, Jankovic BR, Bajic VB, Song L, Gao X.