vcf2diploid 0.2.6a / AlleleSeq 1.2a

:: DESCRIPTION

vcf2diploid is a personal genome constructor, it can be used to construct a personal diploid genome sequence by including personal variants into reference genome.

AlleleSeq is a computational pipeline that is used to study allele-specific expression (ASE) and allele specific binding (ASB).

::DEVELOPER

Gerstein Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

 vcf2diploid , AlleleSeq

:: MORE INFORMATION

Citation:

Mol Syst Biol. 2011 Aug 2;7:522. doi: 10.1038/msb.2011.54.
AlleleSeq: analysis of allele-specific expression and binding in a network framework.
Rozowsky J, Abyzov A, Wang J, Alves P, Raha D, Harmanci A, Leng J, Bjornson R, Kong Y, Kitabayashi N, Bhardwaj N, Rubin M, Snyder M, Gerstein M.