:: DESCRIPTION
Burntrees is a script for manipulating tree (*.t, *.trprobs, *.con) and parameter (*.p) files from MrBayes (v.3). The script exctracts trees and (by default) the taxon translation table and the trailing “end;” from a MrBayes tree file.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
MrAIC.pl is a Perl script for calculating AIC, AICc, BIC, and Akaike weights (for a review, see Burnham and Anderson, 2002) for nucleotide substitution models. Likelihood scores under different models are estimated using PHYML
pMrAIC is the version of MrAIC runs parallel instances of PHYML
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
UPIC (Unique Pattern Informative Combinations) is a decision tool for the cost-effective design of DNA fingerprinting/genotyping experiments using simple-sequence/tandem repeat (SSR/STR) markers.
::DEVELOPER
the Genomics and Bioinformatics Research Unit (GBRU)
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
UPIC: Perl scripts to determine the number of SSR markers to run.
Arias RS, Ballard LL, Scheffler BE.
Bioinformation. 2009 Apr 21;3(8):352-60
:: DESCRIPTION
MrModelfit/Modelfit is the Perl script for running MrModeltest2/Modeltest
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
