:: DESCRIPTION
ECLIPSE (Error Correcting Likelihoods In Pedigree Structure Estimation) is a set of three programs (preproc, eclipse2 and eclipse3) which analyze genetic marker data for genotyping and/or pedigree errors. Using the same preprocessing program (preproc) eclipse2 analyzes data on pairs of individuals, while eclipse3 analyzes data jointly of trios.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
MDR-Phenomics (Multifactor dimensionality reduction-phenomics) aims to detect gene-gene interaction in the pedigree data.
::DEVELOPER
Hussman Institute for Human Genomics, University of Miami
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Mei H, Cuccaro ML, Martin ER.
Multifactor dimensionality reduction-phenomics: a novel method to capture genetic heterogeneity with use of phenotypic variables.
Am J Hum Genet. 2007 Dec; 81(6):1251-61
:: DESCRIPTION
Sibsim is designed to simulate either genotype and/or quantitative phenotype data in family structures in a modern, easy to use and highly scaleable way. sibsim is based on XML, completely written in C++ and published under the GNU General Public License
::DEVELOPER
Daniel Franke (University Hospital Schleswig-Holstein)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Franke, Daniel, Kleensang, André, Ziegler, Andreas
SIBSIM – quantitative phenotype simulation in extended pedigrees
GMS Med Inform Biom Epidemiol 2006;2(1):Doc02
:: DESCRIPTION
PEDIGREE VIEWER reads your simple data file and displays the full pedigree structure on the screen. Each animal is represented by its identity, or its name, or by its value for any of the traits in the data file. You can display a large pedigree of thousands of animals all on the screen at the one time. Data are overlapped on the screen for such large pedigrees, but in one mode an individual’s information is highlighted as the mouse cursor passes over. You can ask to find an animal(s) by identity, or by merit or merit range for a given trait.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Brian P Kinghorn
An algorithm for efficient constrained mate selection
Genetics Selection Evolution 2011, 43:4
