PedApp 2.0 beta – Graphical Approaches to Pedigree Reconstruction

PedApp 2.0 beta

:: DESCRIPTION

PedApp (Pedigree Application) is a graphical approaches to pedigree reconstruction

::DEVELOPER

Anthony Almudevar, PhD

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 PedApp

:: MORE INFORMATION

Citation

Theor Popul Biol. 2007 Mar;71(2):213-29. Epub 2006 Oct 27.
A graphical approach to relatedness inference.
Almudevar A.

hsphase – Pedigree Reconstruction, Detection of Recombination Events, Phasing and Imputation of half-sib Family Group

hsphase

:: DESCRIPTION

hsphase is an R package that implements a very fast method for phasing, sire genotype imputation, identification of paternal strand of origin and recombination events in half-sib families

::DEVELOPER

Cedric Gondro

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux / MacOsX/ Windows
  • R

:: DOWNLOAD

 hsphase

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2014 Jun 7;15:172. doi: 10.1186/1471-2105-15-172.
hsphase: an R package for pedigree reconstruction, detection of recombination events, phasing and imputation of half-sib family groups.
Ferdosi MH1, Kinghorn BP, van der Werf JH, Lee SH, Gondro C.