:: DESCRIPTION
PDA ( Pooled DNA analyzer ) is a powerful tool for analyses of pooled DNA data.
::DEVELOPER
Hsin-Chou Yang and Cathy SJ Fann(Institute of Biomedical Sciences, Academia Sinica, Taiwan)
:: SCREENSHOTS
::REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hsin-Chou Yang, Chia-Ching Pan, Chin-Yu Lin and Cathy SJ Fann (2006).
PDA: pooled DNA analyzer.
BMC Bioinformatics, 7: 233.
:: DESCRIPTION
PDA (Phylogenetic Diversity Algorithm) is a software tool to analyze various aspects of PD and PD-related measures based on both phylogenetic trees and networks
::DEVELOPER
the Center of Integrative Bioinformatics Vienna (CIBIV) headed by Arndt von Haeseler.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Split diversity in constrained conservation prioritization using integer linear programming.
Chernomor O, Minh BQ, Forest F, Klaere S, Ingram T, Henzinger M, von Haeseler A.
Methods Ecol Evol. 2015 Jan;6(1):83-91.
:: DESCRIPTION
PDA, Pipeline Diversity Analysis, is a collection of programs and modules, mainly written in Perl, that automatically can:
explore for potentially polymorphic sequences from a large source of heterogeneous DNA,
extract and sort them out by gene, species and extent of similarity,
align the different groups, and
estimate the genetic diversity in different functional regions.
::DEVELOPER
Sònia Casillas and Antonio Barbadilla. Genomics, Bioinformatics and Evolution Group.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Sònia Casillas and Antonio Barbadilla (2006).
PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large datasets of heterogeneous DNA.
Nucleic Acids Res. 34 (Web Server issue): W632-W634; doi: 10.1093/nar/gkl080
