pcaReduce 1.0 – Hierarchical Clustering of Single Cell Transcriptional Profiles

pcaReduce 1.0

:: DESCRIPTION

pcaReduce is a novel agglomerative clustering method to generate a cell state hierarchy where each cluster branch is associated with a principal component of variation that can be used to differentiate two cell states.

::DEVELOPER

pcaReduce team

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux / Windows/ MacOsX
  • R

:: DOWNLOAD

 pcaReduce

:: MORE INFORMATION

Citation

pcaReduce: hierarchical clustering of single cell transcriptional profiles.
Žurauskienė J, Yau C.
BMC Bioinformatics. 2016 Mar 22;17(1):140. doi: 10.1186/s12859-016-0984-y.