Tag: PBM

PBM – Universal Protein Binding Microarray Analysis Suite

PBM

:: DESCRIPTION

PBM Analysis Suite provides the in-house tools and the procedural methods used in the analysis of universal protein binding microarrays (PBMs) synthesized by Agilent Techonologies

::DEVELOPER

The Bulyk Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/ MacOsX
  • Perl

:: DOWNLOAD

 PBM

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Jun 1;29(11):1390-8. doi: 10.1093/bioinformatics/btt152. Epub 2013 Apr 4.
Bayesian hierarchical model of protein-binding microarray k-mer data reduces noise and identifies transcription factor subclasses and preferred k-mers.
Jiang B1, Liu JS, Bulyk ML.

Berger MF, ML Bulyk
Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors.
Nature Protocols. (2009) 4(3):393-411