Tag: PATtern Recognition

PATRONUS b101 – PATtern Recognition by Optimized Numerical Universal Scoring

PATRONUS b101

:: DESCRIPTION

PATRONUS is a program designed to compute in a very fast way the exact probability of observing a given number of occurrences of a simple motif (that is, a continuous word without gaps) in a sequence. Its intended scope is the analysis of very long biological sequences, like chromosomes or whole genomes of complex organisms.

::DEVELOPER

Paolo Ribeca

:: SCREENSHOTS

N/A.

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 PATRONUS

:: MORE INFORMATION

Citation

arXiv:0801.3675 [q-bio.GN]
Faster exact Markovian probability functions for motif occurrences: a DFA-only approach
Paolo Ribeca, Emanuele Raineri

PRRDB 2.0 – Pattern Recognition Receptor Database

PRRDB 2.0

:: DESCRIPTION

PRRDB is a comprehensive database of pattern recognition receptors and their ligands. This is an updated version of the database PRRDB. It contains extensive information about 467 unique pattern-recognition receptors and 827 ligands manually extracted from ~600 research articles.

::DEVELOPER

PRRDB team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

PRRDB 2.0: a comprehensive database of pattern-recognition receptors and their ligands.
Kaur D, Patiyal S, Sharma N, Usmani SS, Raghava GPS.
Database (Oxford). 2019 Jan 1;2019. pii: baz076. doi: 10.1093/database/baz076.