:: DESCRIPTION
Logol is a language used to describe some patterns in a DNA/RNA/Protein sequence
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Catherine Belleannée, Olivier Sallou, Jacques Nicolas.
Expressive Pattern Matching with Logol.
Application to the Modelling of -1 Ribosomal Frameshift events. JOBIM 2012- 13e Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2012, Rennes, France. pp. 5-14.
:: DESCRIPTION
BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented graph and a set of query sequences, it detects paths in the graph on which query sequences align at most at the given edit distance.
::DEVELOPER
Guillaume Holley, Pierre Peterlongo
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Guillaume Holley, Pierre Peterlongo.
BlastGraph: intensive approximate pattern matching in string graphs and de-Bruijn graphs.
PSC 2012, Aug 2012, Prague, Czech Republic
