PASTRI 0.1 – Probabilistic Algorithm for Somatic TRee Inference

PASTRI 0.1

:: DESCRIPTION

PASTRI is an algorithm that infers tumor phylogenies from one or more bulk DNA sequencing samples.

::DEVELOPER

Raphael Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

PASTRIĀ 

:: MORE INFORMATION

Citation:

Satas G, Raphael BJ.
Tumor phylogeny inference using tree-constrained importance sampling.
Bioinformatics. 2017 Jul 15;33(14):i152-i160. doi: 10.1093/bioinformatics/btx270. PMID: 28882002; PMCID: PMC5870673.