Tag: PANTHER

csnpAnalysis 1.01 – PANTHER Coding SNP Analysis tool

csnpAnalysis 1.01

:: DESCRIPTION

 csnpAnalysis is a software to estimate the likelihood that a particular nonsynonymous (amino-acid changing) coding SNP will cause a functional impact to the protein.

::DEVELOPER

Paul D. Thomas

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 csnpAnalysis

:: MORE INFORMATION

Citation

Paul D. Thomas, et al. 2006.
Applications for protein sequence-function evolution data: mRNA/protein expression analysis and coding SNP scoring tools.
Nucl. Acids Res.34: W645-W650.

PANTHER – Novel tool to Predict Small Molecule Binding into Proteins

PANTHER

:: DESCRIPTION

PANTHER is a rapid virtual screening method that can evaluate tens of millions of small molecules into selected protein target in 24 hours

::DEVELOPER

Computational Bioscience Laboratory, University of Jyväskylä

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux
  • Python

:: DOWNLOAD

 PANTHER

:: MORE INFORMATION

Citation

Ultrafast protein structure-based virtual screening with Panther.
Niinivehmas SP, Salokas K, Lätti S, Raunio H, Pentikäinen OT.
J Comput Aided Mol Des. 2015 Sep 25.

pantherScore 1.03 – PANTHER HMM Scoring tool

pantherScore 1.03

:: DESCRIPTION

 pantherScore scores protein sequences against the entire PANTHER HMM library and analyze your sequences.

::DEVELOPER

Paul D. Thomas

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 pantherScore

:: MORE INFORMATION

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