GRAM – Predict Molecular Effect of Non-coding Variant in Cell Type-specific Manner

GRAM

:: DESCRIPTION

GRAM (GeneRAlized Model) combines a universal regulatory score defined by transcription factor binding with an easily obtainable modifier defined by transcription factor binding and expression to reflect the particular cell type.

::DEVELOPER

Gerstein Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

GRAM

:: MORE INFORMATION

Citation:

GRAM: A GeneRAlized Model to predict the molecular effect of a non-coding variant in a cell-type specific manner.
Lou S, Cotter KA, Li T, Liang J, Mohsen H, Liu J, Zhang J, Cohen S, Xu J, Yu H, Rubin MA, Gerstein M.
PLoS Genet. 2019 Aug 30;15(8):e1007860. doi: 10.1371/journal.pgen.1007860.