SEED 1.5.1
:: DESCRIPTION
SEED is a software for clustering large sets of Next Generation Sequences (NGS) with hundreds of millions of reads in a time and memory efficient manner. Its algorithm joins highly similar sequences into clusters that can differ by up to three mismatches and three overhanging residues.
::DEVELOPER
:: SCREENSHOTS
n/a
:: REQUIREMENTS
- Linux/ MacOsX/Windows
:: DOWNLOAD
:: MORE INFORMATION
Citation
SEED: efficient clustering of next-generation sequences.
Bao E, Jiang T, Kaloshian I, Girke T.
Bioinformatics. 2011 Sep 15;27(18):2502-9. doi: 10.1093/bioinformatics/btr447. Epub 2011 Aug 2.