LmCGST 1.0
:: DESCRIPTION
LmCGST is a bioinformatic pipeline that takes in raw next-generation sequencing reads, calculates a subject HCC profile, compares it to an expandable database, assigns a sequence type, and performs a phylogenetic analysis.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
The Listeria monocytogenes Core-Genome Sequence Typer (LmCGST): a bioinformatic pipeline for molecular characterization with next-generation sequence data.
Pightling AW, Petronella N, Pagotto F.
BMC Microbiol. 2015 Oct 22;15(1):224. doi: 10.1186/s12866-015-0526-1.