MUSIC – MUltiScale enrIchment Calling for ChIP-Seq Datasets

MUSIC

:: DESCRIPTION

MUSIC is an algorithm for identification of enriched regions at multiple scales in the read depth signals from ChIP-Seq experiments.

::DEVELOPER

Gerstein Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

MUSIC

:: MORE INFORMATION

Citation:

Genome Biol. 2014;15(10):474.
MUSIC: identification of enriched regions in ChIP-Seq experiments using a mappability-corrected multiscale signal processing framework.
Harmanci A1, Rozowsky J, Gerstein M.

Genome MuSiC 0.401 – Mutational Significance In Cancer package

Genome MuSiC 0.401

:: DESCRIPTION

The MuSiC (Mutational Significance In Cancer package) suite is a set of tools aimed at determining the significance of somatic mutations discovered within a given cohort of cancer samples, incorporating the cohort’s alignment data, variant lists and any relevant clinical data.

::DEVELOPER

The Genome Institute at Washington University School of Medicine

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  MuSiC

:: MORE INFORMATION

Citation

Genome Res. 2012 Aug;22(8):1589-98. doi: 10.1101/gr.134635.111. Epub 2012 Jul 3.
MuSiC: identifying mutational significance in cancer genomes.
Dees ND1, Zhang Q, Kandoth C, Wendl MC, Schierding W, Koboldt DC, Mooney TB, Callaway MB, Dooling D, Mardis ER, Wilson RK, Ding L.

Darwin Rocks 1.0.3 – Evolution of Music

Darwin Rocks 1.0.3

:: DESCRIPTION

Darwin Rocks let your favourite ringtone develop by evolution! In this game music develops from the musical primordial soup onwards. Due to random mutations each song sounds a bit different and each tune has offspring that sounds various. You decide which musical creature you like and thus you increase its chance of reproduction. The continuous process of listening and rating has a big impact on the direction of development. It will lead you to some very surprising results. This all happens although each single change is just accidental. This is the power of selection.

::DEVELOPER

Darwin Rocks Team

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / MacOsX / Linux
  • Java

:: DOWNLOAD

Darwin Rocks

:: MORE INFORMATION

DNA2ABC 1.0.1 – Turn DNA Sequences into Musical Sequences

DNA2ABC 1.0.1

:: DESCRIPTION

dna2abc turns DNA sequences into musical sequences. The key feature is the rule editor; a rule is a regular expression paired with a Tcl script. dna2abc scans a DNA sequence, testing each regular expression: if it matches, the Tcl script is run.

::DEVELOPER

Phil Mercurio

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

DNA2ABC

:: MORE INFORMATION

dna2abc is released under the GPL (see License.txt in the release). You’re free to do pretty much anything with it except sell it or modify it without sharing your modifications.

ProteinMusic 1.1 – Convert DNA Sequences into Music

ProteinMusic 1.1

:: DESCRIPTION

ProteinMusic is a Java program converting DNA sequences into music.

::DEVELOPER

Andreas. Karwath

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Java

:: DOWNLOAD

ProteinMusic

:: MORE INFORMATION

Citation:

King, R.D. & Angus, C.G. (1996)
PM: Protein Music.
CABIOS. 12, pages 251-252