:: DESCRIPTION
TAGster is a tool to select, evaluate and visualize LD tag SNPs for single or multiple populations
::DEVELOPER
Jack A. Taylor, M.D., Ph.D. , Zongli Xu, Ph.D.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Xu Z, Kaplan NL, Taylor JA.
TAGster: efficient selection of LD tag SNPs in single or multiple populations.
Bioinformatics. 2007 23:3254-5. Epub 2007 Sep 7
:: DESCRIPTION
mPopTag (Multi-Population Tag SNP Picker) is a tool used to select or evaluate linkage disequilibrium (LD) tag SNPs for multiple populations. The program analyzes patterns of LD–measured by composite linkage disequilibrium (CLD) or r2–between polymorphic sites in a genome region for multiple populations. It also uses an agreedy algorithm to select a single set of near-minimum numbers of LD tag SNPs for multiple populations.
::DEVELOPER
Jack A. Taylor, M.D., Ph.D. , Zongli Xu, Ph.D.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Xu Z, Kaplan NL, Taylor JA.
Tag SNP selection for candidate gene association studies using HapMap and gene resequencing data.
Eur J Hum Genet 2007 Oct;15(10):1063-70.
