MitoScape v1.0

:: DESCRIPTION

MitoScape is a novel, big-data, software for extracting mitochondrial DNA sequences from NGS.

::DEVELOPER

Larry N. Singh

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

MitoScape

:: MORE INFORMATION

Citation

Singh LN, Ennis B, Loneragan B, Tsao NL, Lopez Sanchez MIG, Li J, Acheampong P, Tran O, Trounce IA, Zhu Y, Potluri P; Regeneron Genetics Center, Emanuel BS, Rader DJ, Arany Z, Damrauer SM, Resnick AC, Anderson SA, Wallace DC.
MitoScape: A big-data, machine-learning platform for obtaining mitochondrial DNA from next-generation sequencing data.
PLoS Comput Biol. 2021 Nov 11;17(11):e1009594. doi: 10.1371/journal.pcbi.1009594. Epub ahead of print. PMID: 34762648.

HaploGrep 2.2.9

:: DESCRIPTION

HaploGrep is a web application for finding the corresponding haplogroup to given mtDNA profiles based on Phylotree (mtDNA classification tree).

::DEVELOPER

GenEpi – Division of Genetic Epidemiology Innsbruck

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows/Linux

JRE

:: DOWNLOAD

:: MORE INFORMATION

Citation

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing.
Weissensteiner H, Pacher D, Kloss-Brandstätter A, Forer L, Specht G, Bandelt HJ, Kronenberg F, Salas A, Schönherr S.
Nucleic Acids Res. 2016 Apr 15. pii: gkw233

Tag: mtDNA