MOSAICS 1.0.0 – Analysis of ChIP-seq data

MOSAICS 1.0.0

:: DESCRIPTION

MOSAICS is an R package for the analysis of one-sample or two-sample ChIP-seq data.

::DEVELOPER

Pei Fen Kuan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 MOSAICS

:: MORE INFORMATION

Citation

Kuan, P., Chung, D., Pan, G., Thomson, J., Stewart, R., and Keles, S. (2011).
A Statistical Framework for the Analysis of ChIP-Seq Data.
Journal of the American Statistical Association

MOSAICS 4.0 / PymoSAICS 0.2.0 – Methodologies for Optimization and SAmpling In Computational Studies

MOSAICS 4.0 / PymoSAICS

:: DESCRIPTION

MOSAICS is a sampling program developed to improve sampling efficiency by incorporating natural move-sets for proteins and nucleic acids.

MOSAICS-EM is a software package designed to refine molecular conformations directly against two-dimensional (2D) electron-microscopy images.

PymoSAICS is a pyMol plugin of MOSAICS.

::DEVELOPER

MOSAICS team

:: SCREENSHOTS

PymoSAICS

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • Python
  • pyMOL

:: DOWNLOAD

 MOSAICS / PymoSAICS

:: MORE INFORMATION

Citation

Exploring peptide/MHC detachment processes using Hierarchical Natural Move Monte Carlo.
Knapp B, Demharter S, Deane CM, Minary P.
Bioinformatics. 2015 Sep 22. pii: btv502