MORGAN 3.4 – Monte Carlo Genetic Analysis

MORGAN 3.4

:: DESCRIPTION

MORGAN (Monte Carlo Genetic Analysis) is a collection of programs and libraries developed at the University of Washington under the PANGAEA (Pedigree Analysis for Genetics and Epidemiological Attributes) umbrella. This software implements a number of methods for the analysis of data observed on members of a pedigree, with the main programs implementing Markov Chain Monte Carlo (MCMC) methods.

::DEVELOPER

Elizabeth A. Thompson

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 MORGAN 

:: MORE INFORMATION

Citation:

E. A. Thompson (1995)
Monte Carlo in Genetic Analysis.
Technical report No. 294, Department of Statistics, University of Washington.

E. A. Thompson (2000)
Statistical Inferences from Genetic Data on Pedigrees
NSF-CBMS Regional Conference Series in Probability and Statistics. Volume 6. IMS, Beachwood, OH.

lnkg2lmlnk 20120312 / lnkg2lmm 20070901 – Converter from Linkage-style to Morgan ver 3 style data files

lnkg2lmlnk 20120312 / lnkg2lmm 20070901

:: DESCRIPTION

lnkg2lmlnk is a new converter from Linkage-style to Morgan ver 3 style data files

lnkg2lmm is a Perl script to convert linkage-style files to MORGAN-lm_markers-style files.

::DEVELOPER

Ellen M. Wijsman

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 lnkg2lmlnk / lnkg2lmm

:: MORE INFORMATION

Citation:

Am J Hum Genet. 2006 Nov;79(5):846-58. Epub 2006 Sep 20.
Multipoint linkage analysis with many multiallelic or dense diallelic markers: Markov chain-Monte Carlo provides practical approaches for genome scans on general pedigrees.
Wijsman EM1, Rothstein JH, Thompson EA.