:: DESCRIPTION
EpiDOCK is the first structure-based server for MHC class II binding prediction.
::DEVELOPER
Drug Design Group, Medical University of Sofia
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Protein Eng Des Sel. 2013 Oct;26(10):631-4. doi: 10.1093/protein/gzt018. Epub 2013 May 9.
EpiDOCK: a molecular docking-based tool for MHC class II binding prediction.
Atanasova M1, Patronov A, Dimitrov I, Flower DR, Doytchinova I.
:: DESCRIPTION
GeauxDock is an ultra-fast automated docking program, designed to predict how small ligands bind to pharmacologically relevant macromolecules. GeauxDock employs a novel hybrid force field and a Monte Carlo protocol for the efficient sampling of conformational space.
::DEVELOPER
:: SCREENSHOTS
n/a
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
GeauxDock: A novel approach for mixed-resolution ligand docking using a descriptor-based force field.
Ding Y, Fang Y, Feinstein WP, Ramanujam J, Koppelman DM, Moreno J, Brylinski M, Jarrell M.
J Comput Chem. 2015 Oct 15;36(27):2013-26. doi: 10.1002/jcc.24031. d
:: DESCRIPTION
AutoDock Vina is a new open-source program for drug discovery, molecular docking and virtual screening, offering multi-core capability, high performance and enhanced accuracy and ease of use.
::DEVELOPER
Dr. Oleg Trott , in Molecular Graphics Laboratory , The Scripps Research Institute
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
O. Trott, A. J. Olson,
AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading,
Journal of Computational Chemistry 31 (2010) 455-461