SynBioWave 2.0 – Google Wave Implementation for Molecular Biologists

SynBioWave 2.0

:: DESCRIPTION

SynBioWave is a Google Wave Implementation for molecular biologists. It aims to unite the stunning possibilities regarding a cooperative workflow of a web application with the comprehensive assortment of sequence tools a desktop application offers.

::DEVELOPER

SynBioWave team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Mac OsX / WIndows
  • JRE

:: DOWNLOAD

 SynBioWave

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Nov 1;26(21):2782-3. doi: 10.1093/bioinformatics/btq518. Epub 2010 Sep 13.
SynBioWave–a real-time communication platform for molecular and synthetic biology.
Staab PR1, Walossek J, Nellessen D, Grünberg R, Arndt KM, Müller KM.

BIRCH 3.80 – Provide Bioinformatics Resources to Molecular Biologists

BIRCH 3.80

:: DESCRIPTION

BIRCH (Biological Research Computer Hierarchy)has provided bioinformatics resources to molecular biologists at the University of Manitoba. BIRCH is an organizational framework for delivering bioinformatics resources to a user group, scaling from a single lab to a large institution. The BIRCH core distribution includes many popular bioinformatics programs, unified within the GDE (Genetic Data Environment) graphic interface. Of equal importance, BIRCH provides the system administrator with tools that simplify the job of managing a multiuser bioinformatics system across different platforms and operating systems. These include tools for integrating locally-installed programs and databases into BIRCH, and for customizing the local BIRCH system to meet the needs of the user base. BIRCH can also act as a front end to provide a unified view of already-existing collections of bioinformatics software.

::DEVELOPER

FRISTENSKY LAB

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 BIRCH

:: MORE INFORMATION

Citation

Brian Fristensky
BIRCH: A user-oriented, locally-customizable, bioinformatics system
BMC Bioinformatics 2007, 8:54 (9 February 2007)

bioknoppix 0.2.1 – Knoppix Linux Live CD for Molecular Biologist

bioknoppix 0.2.1

:: DESCRIPTION

Bioknoppix is a customized distribution of Knoppix Linux Live CD. With this distrubution you just boot from the CD and you have a fully functional Linux OS distribution with open source applications targeted for the molecular biologist. Beside using some RAM, Bioknoppix doesn’t touch the host computer, being ideal for demonstrations, molecular biology students, workshops, etc.

::DEVELOPER

Carlos M Rodriguez (carlos@hpcf.upr.edu), High Performance Computing Facility ,University of Puerto Rico

:: SCREENSHOTS

:: REQUIREMENTS

  • bootable CD-ROM drive

:: DOWNLOAD

 bioknoppix

:: MORE INFORMATION