Tag: mobility

Mobi 1.1 – NMR Mobility Detection

Mobi 1.1

:: DESCRIPTION

Mobi is a new web server to detect and visualize flexible regions in NMR solved structures. Mobi is based on a simple algorithm to find regions with different conformations among all the models in a NMR solved PDB structure ensemble.

::DEVELOPER

The BioComputing UP lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Nov 15;26(22):2916-7. doi: 10.1093/bioinformatics/btq537. Epub 2010 Sep 21.
MOBI: a web server to define and visualize structural mobility in NMR protein ensembles.
Martin AJ1, Walsh I, Tosatto SC.

mobility 0.1 – Genomic Fluidity Perl & MATLAB Scripts

mobility 0.1

:: DESCRIPTION

mobility is a collection of Perl scripts to calculate gene-level similarity among annotated genomes. The scripts can be executed from the command line and the only dependencies are BioPerl and NCBI BLAST. Separately, we include a MATLAB script to calculate fluidity and its variance directly from matrices of shared and total gene counts.

::DEVELOPER

WeitzGroup@GeorgiaTech

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

mobility

:: MORE INFORMATION

Citation:

Kislyuk et al.
Genomic fluidity: an integrative view of gene diversity within microbial populations
BMC Genomics 12: 32 (2011).