MetaCompass v2.0-beta – Reference-guided Assembly of Metagenomes

MetaCompass v2.0-beta

:: DESCRIPTION

MetaCompass represents the first effective approach for reference-guided metagenomic assembly of low-abundance bacterial genomes that can complement and improve upon de novo metagenomic assembly methods.

::DEVELOPER

Treangen Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • Python

:: DOWNLOAD

MetaCompass

:: MORE INFORMATION

MetaCompass 1.0 – Comparative Assembly of Metagenomic Sequences

MetaCompass 1.0

:: DESCRIPTION

MetaCompass is a software package for comparative assembly of metagenomic reads. MetaCompass achieves comparable assembly performance to the state of the art de novo assemblers, but these two different approaches complement each other a lot. So combining contigs between MetaCompass and other independent de novo assemblers give us the best overall metagenomic assembly.

::DEVELOPER

Bo Liu

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • BLAST
  • Bowtie 2
  • Perl

:: DOWNLOAD

 MetaCompass

:: MORE INFORMATION