Poisson meta-analysis – Mixed-Effects Poisson Regression Models for Meta-Analysis

Poisson meta-analysis

:: DESCRIPTION

Poisson meta-analysis is a software  for meta-analysis of follow-up studies with constant or varying duration using the binary nature of the data directly. We use a generalized linear mixed model framework with the Poisson likelihood and the log link function. We ?t models with ?xed and random study effects using Stata for performing meta-analysis of follow-up studies with constant or varying duration. The methods that we present are capable of estimating all the effect measures that are widely used in such studies such as the Risk Ratio, the Risk Difference (in case of studies with constant duration), as well as the Incidence Rate Ratio and the Incidence Rate Difference (for studies of varying duration). The methodology presented here naturally extends previously published methods for meta-analysis of binary data in a generalized linear mixed model framework using the Poisson likelihood. Simulation results suggest that the method is uniformly more powerful compared to summary based methods, in particular when the event rate is low and the number of studies is small. The methods were applied in several already published meta-analyses with very encouraging results.

::DEVELOPER

Computational Genetics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsX/Linux
  • Stata

:: DOWNLOAD

 Poisson meta-analysis

:: MORE INFORMATION

Citation

Bagos PG, Nikolopoulos GK.
Mixed-effects Poisson regression models for meta-analysis of follow-up studies with constant or varying durations. 2009,
The International Journal of Biostatistics, 5(1), Article 21
http://works.bepress.com/pbagos/19/

metagen – Meta-analysis of Genetic association Studies

metagen

:: DESCRIPTION

metagen performs fixed-, and random-effects meta-analysis of genetic association case-control studies using Individual Patient Data (IPD). metagen performs meta-analysis using fixed- and random-effects logistic regression models, treating the multiple genotypes as independent variables. By default, metagen performs tests for the overall heterogeneity of the genotypes effects, for the heterogeneity of the assumed genetic model of inheritance as well as for the between-studies heterogeneity of the genetic model.

::DEVELOPER

Computational Genetics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsX/Linux
  • Stata

:: DOWNLOAD

 metagen

:: MORE INFORMATION

Citation

Bagos PG, Nikolopoulos GK.
A method for meta-analysis of case-control genetic association studies using logistic regression. 2007,
Statistical Applications in Genetics and Molecular Biology, 6(1): Article 17

Metal 20110325 – Meta-analysis of Genomewide Association Scans

Metal 20110325

:: DESCRIPTION

Metal (Meta Analysis Helper) is designed to facilitate meta-analysis of large datasets (such as several whole genome scans) in a convenient, rapid and memory efficient manner.

::DEVELOPER

Abecasis Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Mac /  Linux

:: DOWNLOAD

Metal

:: MORE INFORMATION

Citation:

Cristen J. Willer, Yun Li and Gonçalo R. Abecasis
METAL: fast and efficient meta-analysis of genomewide association scans
Bioinformatics (2010) 26 (17): 2190-2191.

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