mCUDA-MEME 3.0.16
:: DESCRIPTION
mCUDA-MEME is a further extension of CUDA-MEME based on MEME algorithm for mutliple GPUs using a hybrid combination of CUDA, MPI and OpenMP.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- CUDA toolkits and SDK 2.0 or higher.
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Yongchao Liu, Bertil Schmidt, Weiguo Liu, Douglas L. Maskell:
“CUDA-MEME: accelerating motif discovery in biological sequences using CUDA-enabled graphics processing units“.
Pattern Recognition Letters, 2010, 31(14): 2170 – 2177
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell:
“An ultrafast scalable many-core motif discovery algorithm for multiple GPUs“.
10th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2011), 2011, 428-434